Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTACACACCAGAACCAGGGCCGCGGCCACATTGCAGT
((((((((((((((.(..(((&.)))).))))))))).....))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015874
GeneSymbolRBPJ
Binding site1302,1341
Score0.808
Seed1
Au0.412
Energy-21.4
Binding len26
Me-4.673
Phylopstem5.206701468421052
Phylopflank5.1720918750000004
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end5
PositionCDS
2D Structure