Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCAAAAGCAGCTGTG
..((((((((..((((((...&))))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015874
GeneSymbolRBPJ
Binding site4910,4927
Score0.923
Seed1
Au0.647
Energy-21.1
Binding len17
Me-11.129
Phylopstem4.40278375
Phylopflank2.5413090624999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure