Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGAGCAAGCTACATTTTATTTTAAATGAGTCAGGTG
(((((((.(((((((((((...&))))))))).......................)).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015879
GeneSymbolST8SIA3
Binding site8490,8533
Score0.923
Seed1
Au0.647
Energy-18.2
Binding len43
Me-6.251
Phylopstem0.20102762352941175
Phylopflank0.03910394700000002
Longest consecutive pairings9
Position of longest consecutive pairings34
Pairings in 3prime end5
Position3UTR
2D Structure