Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAACCCCAGCA
.....((((.(((((.(((((&)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015879
GeneSymbolST8SIA3
Binding site914,930
Score0.923
Seed0
Au0.618
Energy-19.6
Binding len16
Me-15.141
Phylopstem5.0836078
Phylopflank5.27976993625
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end7
PositionCDS
2D Structure