Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCAGCAAACACAGCTGTAT
.((((((((.(..(((..((.&))..)))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015879
GeneSymbolST8SIA3
Binding site6213,6233
Score1.0
Seed1
Au0.603
Energy-18.8
Binding len20
Me-9.672
Phylopstem-0.022039625000000007
Phylopflank0.406685204
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure