Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ACGTTGGCCAGGC
.((((((...((((((......&)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015885
GeneSymbolPCF11
Binding site7340,7353
Score0.846
Seed1
Au0.471
Energy-16.2
Binding len13
Me-8.406
Phylopstem0.1468035
Phylopflank-0.05914473750000006
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure