Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGGAGGGGGGCCGCGGCGCAAT
((((.(((((((((.(.....&.).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015885
GeneSymbolPCF11
Binding site285,311
Score0.846
Seed0
Au0.25
Energy-21.3
Binding len17
Me-8.792
Phylopstem2.27439
Phylopflank2.277052115
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure