Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAGCTTTAGCTGA
...((((((.(((((((((..&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015885
GeneSymbolPCF11
Binding site2532,2549
Score0.923
Seed0
Au0.544
Energy-21.1
Binding len17
Me-7.757
Phylopstem2.6531131111111117
Phylopflank2.8030719
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure