Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATGATCTGGCTGCAGA
(((((((((.((((((.((((&)))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015888
GeneSymbolHOOK1
Binding site218,239
Score0.846
Seed1
Au0.471
Energy-20.8
Binding len21
Me-5.18
Phylopstem3.888458888888889
Phylopflank1.9197200387500002
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure