Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTCTTTGTGGCTGGGA
.((((((.(((((.(.((((((&))))))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015891
GeneSymbolCDC40
Binding site1181,1201
Score0.846
Seed1
Au0.588
Energy-16.8
Binding len20
Me-7.197
Phylopstem5.105021666666667
Phylopflank6.068659762499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure