Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGAGAAATCAGGATCTCCTAGGTCATTGCTTCGCAGCTGTGAT
((((((((((((..((((...&.)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015891
GeneSymbolCDC40
Binding site2521,2568
Score1.0
Seed1
Au0.574
Energy-21.1
Binding len19
Me-6.084
Phylopstem0.71019775
Phylopflank0.47050987600000005
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure