Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAGACCTCTATGACCGCCTGCGGCTGCAC
.((((((((((((((((((((&.)))).)))))))))....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015892
GeneSymbolCHST15
Binding site1390,1423
Score0.923
Seed1
Au0.382
Energy-26.8
Binding len27
Me-3.793
Phylopstem-0.330579252
Phylopflank-0.34640441874999994
Longest consecutive pairings9
Position of longest consecutive pairings12
Pairings in 3prime end8
PositionCDS
2D Structure