Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATCAGTACAAGTGCTGCAGCTGCAGC
(((((((((((((((((....&.))))...))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015902
GeneSymbolUBR5
Binding site5734,5763
Score0.846
Seed1
Au0.426
Energy-24.9
Binding len22
Me-3.938
Phylopstem5.6916803499999995
Phylopflank5.405982521250001
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure