Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATTTGCATTGAATCATGCCAT
...((((((.((((((((((((&))))))))))))....)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015906
GeneSymbolTRIM33
Binding site4017,4040
Score0.923
Seed0
Au0.676
Energy-17.8
Binding len23
Me-7.757
Phylopstem2.284283925
Phylopflank2.1363893475
Longest consecutive pairings12
Position of longest consecutive pairings11
Pairings in 3prime end8
Position3UTR
2D Structure