Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TACAGCTGCAGCA
.....((((((((((((....&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015907
GeneSymbolLAP3
Binding site1653,1666
Score0.846
Seed0
Au0.574
Energy-20.9
Binding len13
Me-13.666
Phylopstem5.617733083333333
Phylopflank4.56428675125
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure