Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCGACCGCAGTGTTAACATTAAAGAGATCTGTTGGAACCTGCAGA
(((((((((((((((.(((((&))))))))))))))............................)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015908
GeneSymbolSRRT
Binding site1645,1694
Score0.923
Seed1
Au0.5
Energy-25.3
Binding len49
Me-4.171
Phylopstem5.212981930232556
Phylopflank4.44164222
Longest consecutive pairings14
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure