Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGGATCTAGCCAGGTG
(((((((.....((((((....&)))))).......))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015909
GeneSymbolNBAS
Binding site3602,3623
Score0.923
Seed1
Au0.5
Energy-18.8
Binding len21
Me-14.722
Phylopstem3.7694638571428567
Phylopflank3.48391053875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure