Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCATGTTGCAGGACCATAAGCAGGGGTGTGTCAGGC
.((((((((((..(((......&.)))...)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015914
GeneSymbolTXNDC11
Binding site1643,1681
Score0.923
Seed1
Au0.5
Energy-18.6
Binding len18
Me-8.429
Phylopstem3.9321337000000005
Phylopflank2.3382822749999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure