Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCGGCTGCAGAGAAGGCTGGTATGTCTGCAGA
((((((((((((((((.(((.&))).))))))))))...............)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015917
GeneSymbolGSTK1
Binding site486,522
Score0.923
Seed1
Au0.441
Energy-23.2
Binding len36
Me-3.938
Phylopstem1.7927017806451608
Phylopflank1.484626105875
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end6
PositionCDS
2D Structure