Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGGCAGTAACTTCTGGGCTGTGGTTGTAAA
((((((((((((((...((((&.))))...)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015919
GeneSymbolZNF226
Binding site528,561
Score0.923
Seed1
Au0.559
Energy-18.9
Binding len23
Me-4.906
Phylopstem0.09122533714285715
Phylopflank0.0025307250000000253
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure