Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAGCTTGCTAGCTGTG
..(((((((((((((((((..&))))))))).)).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015920
GeneSymbolRPS27L
Binding site8,28
Score0.91
Seed1
Au0.386
Energy-22.8
Binding len20
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position5UTR
2D Structure