Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTCATCCAGCTGCAGC
(((((((((.((.((..(((.&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015922
GeneSymbolNSDHL
Binding site1043,1062
Score0.923
Seed1
Au0.397
Energy-20.4
Binding len19
Me-6.702
Phylopstem1.5054667433333335
Phylopflank3.650072788375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure