Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GATCCCATTTTCAATGAAGAATTGCTTCCAGTTACTTTGTAACTGCCAGGTC
(((((((((((((.((((....&.)))).)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015929
GeneSymbolLIPT1
Binding site217,269
Score0.846
Seed1
Au0.603
Energy-20.3
Binding len22
Me-4.794
Phylopstem1.4674883333333333
Phylopflank0.6881554509999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure