Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTGGGTACGACCGGAAGCCGCAGA
((((.(((.((((((((....&.))))))))..))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015929
GeneSymbolLIPT1
Binding site59,86
Score0.923
Seed0
Au0.353
Energy-19.8
Binding len20
Me-9.113
Phylopstem-0.679126125
Phylopflank-0.66380519875
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
Position5UTR
2D Structure