Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGTCCAACCCCAGCTGGAT
.(.((((((.(((((...(((&)))...))))).)))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015929
GeneSymbolLIPT1
Binding site626,647
Score0.846
Seed0
Au0.529
Energy-19.8
Binding len21
Me-6.826
Phylopstem2.2334756666666666
Phylopflank3.2798412812500004
Longest consecutive pairings6
Position of longest consecutive pairings3
Pairings in 3prime end5
PositionCDS
2D Structure