Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGGTATTGCTGTGGCTGTAC
.((((((((((((.(((..((&))..))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015931
GeneSymbolSSUH2
Binding site1310,1331
Score0.846
Seed1
Au0.441
Energy-19.1
Binding len21
Me-4.65
Phylopstem2.0209216666666667
Phylopflank1.6131646537500002
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure