Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGTTTACTGTAATAGTGTGCTGTTCATGGAAACCGAGGGCTGCAT
.(((((((.(((((.......&.)))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015932
GeneSymbolPOMP
Binding site469,514
Score0.846
Seed1
Au0.603
Energy-18.9
Binding len16
Me-5.818
Phylopstem3.147494857142857
Phylopflank2.623464075
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure