Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGTTTAGGGCAGTAGCTGCT
..((((((((.(((.((((((&)))...))).))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015938
GeneSymbolNMD3
Binding site2329,2352
Score0.923
Seed1
Au0.632
Energy-20.7
Binding len23
Me-8.517
Phylopstem0.7629232375000001
Phylopflank0.31488829374999994
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure