Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TTGCTGCCAAGGCTGCAGA
((((((((..(((.((((...&)))).)))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015941
GeneSymbolATP6V1H
Binding site302,321
Score0.846
Seed1
Au0.529
Energy-20.4
Binding len19
Me-7.093
Phylopstem0.57521
Phylopflank0.021016396249999972
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure