Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TACATGTTGGCCAGGC
.((((((..((.(((((.....&)))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015945
GeneSymbolSLC35C2
Binding site5202,5218
Score0.846
Seed1
Au0.588
Energy-18.5
Binding len16
Me-10.51
Phylopstem3.5996615
Phylopflank3.7270082024999995
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end3
Position3UTR
2D Structure