Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTCTACAATGTGCCCTGGC
.((.((((((...((((((((.&)))))))).))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015945
GeneSymbolSLC35C2
Binding site5746,5766
Score0.808
Seed0
Au0.471
Energy-18.0
Binding len20
Me-14.286
Phylopstem0.40612125
Phylopflank0.267725739
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end7
Position3UTR
2D Structure