Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGGGACCTGTGAGCGCTGCAT
.((((((.((((((.((((((&)))))).)))).....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015945
GeneSymbolSLC35C2
Binding site58,83
Score0.846
Seed1
Au0.397
Energy-23.8
Binding len25
Me-6.842
Phylopstem0.79599735
Phylopflank-0.106940065
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure