Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCTACAACAAGTGGCTGACAAA
((((((((((.((((((((((&))))..))))))..))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015945
GeneSymbolSLC35C2
Binding site405,431
Score0.846
Seed1
Au0.5
Energy-21.6
Binding len26
Me-6.762
Phylopstem-0.45864256666666675
Phylopflank0.14701101624999996
Longest consecutive pairings7
Position of longest consecutive pairings5
Pairings in 3prime end8
PositionCDS
2D Structure