Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCCTCTTATAGCTATTGCCTATCTCTGCCTTTGCAGCTGTT
..((((((((((((((((((.&.))))))))))...................)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015952
GeneSymbolRWDD1
Binding site5100,5145
Score1.0
Seed1
Au0.603
Energy-21.2
Binding len39
Me-4.957
Phylopstem0.03781360648648647
Phylopflank0.05938277937499998
Longest consecutive pairings10
Position of longest consecutive pairings28
Pairings in 3prime end7
Position3UTR
2D Structure