Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTCGCAAGCGCTGCTGTAAC
(((((((.(((.((((.((((&)))).)))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015954
GeneSymbolDERA
Binding site1369,1391
Score0.923
Seed1
Au0.515
Energy-22.8
Binding len22
Me-9.598
Phylopstem-0.8387024714285715
Phylopflank-0.09142136250000002
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure