Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGAGGCTGCAGCC
.....(((((((((...((((&))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015959
GeneSymbolTMX2
Binding site977,993
Score0.846
Seed0
Au0.529
Energy-20.0
Binding len16
Me-14.634
Phylopstem0.5264324444444445
Phylopflank0.25672559999999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure