Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCTGCACAGCTA
....(((((((((((((((((&))))))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015962
GeneSymbolFCF1
Binding site1011,1031
Score0.923
Seed0
Au0.559
Energy-24.1
Binding len20
Me-9.547
Phylopstem0.05257342105263161
Phylopflank0.0790117125
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure