Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAAGTACAAGGCAGACAAAACCTATCCTACAACTGTGGCTGA
...((((((((((((((((((&.))))....)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015967
GeneSymbolPTPN22
Binding site194,238
Score0.846
Seed0
Au0.588
Energy-24.1
Binding len24
Me-6.515
Phylopstem-0.13917835454545452
Phylopflank0.019947964999999988
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure