Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTATCCTCAGCTGTGAA
(((((((((.((..((((((.&)))))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015967
GeneSymbolPTPN22
Binding site2010,2029
Score0.974
Seed1
Au0.574
Energy-21.1
Binding len19
Me-7.326
Phylopstem1.4771695722222222
Phylopflank0.2669268868750001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure