Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCTGTTGGAATCTCTGCAAG
(((((((.((((((((((((.&)))))))))))).)......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015972
GeneSymbolPOLR1D
Binding site625,652
Score0.923
Seed1
Au0.574
Energy-22.9
Binding len27
Me-6.251
Phylopstem0.3832086583333334
Phylopflank0.7093425099999999
Longest consecutive pairings12
Position of longest consecutive pairings15
Pairings in 3prime end7
Position3UTR
2D Structure