Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTAAAAGACTGAAATGTAGCTGCAGT
((((((((((((((.((((((&))))))...)))).....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015975
GeneSymbolTAF9B
Binding site882,911
Score1.0
Seed1
Au0.691
Energy-22.0
Binding len29
Me-4.673
Phylopstem0.892251147368421
Phylopflank0.5365194262499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure