Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCGTTGCTGTGCCGC
...(((((((((((((((....&)))))))).))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_015981
GeneSymbolCAMK2A
Binding site1636,1653
Score0.846
Seed0
Au0.338
Energy-19.6
Binding len17
Me-6.515
Phylopstem1.56575
Phylopflank1.4506
Longest consecutive pairings8
Position of longest consecutive pairings9
Pairings in 3prime end4
Position3UTR
2D Structure