Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCACTGCAGTTGCT
..((((((((((.((..((((&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015983
GeneSymbolUBE2D4
Binding site3412,3429
Score1.0
Seed1
Au0.529
Energy-21.4
Binding len17
Me-6.479
Phylopstem0.08124434
Phylopflank-0.06240548775
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure