Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTCAGCCCAGCGTAGTTGTAAT
(((((((((((((((..(((.&))))))))....)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015986
GeneSymbolCRLF3
Binding site1415,1438
Score0.846
Seed1
Au0.603
Energy-18.8
Binding len23
Me-4.171
Phylopstem0.4598418894736843
Phylopflank0.597682315
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure