Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCTGGATTTGGAGCTGCGGA
((((((((((((((((.....&)))))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_015989
GeneSymbolCSAD
Binding site523,549
Score0.923
Seed1
Au0.397
Energy-20.7
Binding len26
Me-3.938
Phylopstem0.10754879999999999
Phylopflank-0.3258054712499999
Longest consecutive pairings8
Position of longest consecutive pairings18
Pairings in 3prime end3
PositionCDS
2D Structure