Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGAACAGGGAAATTAGCCGAGCTGCAGG
((((((((.((((((......&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016004
GeneSymbolIFT52
Binding site527,558
Score0.885
Seed1
Au0.471
Energy-20.5
Binding len16
Me-5.227
Phylopstem5.547297500000001
Phylopflank4.517639347499999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure