Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTACACAGCTGTAGAAAGGACTGCGAA
((((((((((((((((..(((&)))..))))))))))......)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016006
GeneSymbolABHD5
Binding site4810,4838
Score0.846
Seed1
Au0.603
Energy-20.0
Binding len28
Me-3.938
Phylopstem-0.043146504545454566
Phylopflank-0.039306738750000014
Longest consecutive pairings10
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure