Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGTTCACGGAAACGACAGCTGCGGCTGCGGG
((((((((((((((((.....&.)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016009
GeneSymbolSH3GLB1
Binding site166,198
Score0.923
Seed1
Au0.294
Energy-27.5
Binding len18
Me-3.938
Phylopstem1.11612315
Phylopflank0.40257329999999997
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure