Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTCGAGCAACTGCAGCCAGGGGATTCTGTCATCCAGAATGCAT
.(((((((((((((((.((((&))))...)))))))))))......................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_016011
GeneSymbolMECR
Binding site557,602
Score0.846
Seed1
Au0.441
Energy-20.4
Binding len45
Me-3.793
Phylopstem-0.47385511891891896
Phylopflank-0.33703031125000005
Longest consecutive pairings11
Position of longest consecutive pairings27
Pairings in 3prime end7
PositionCDS
2D Structure