Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCTGGAGCTCCAGCTGA
...((((((.((((.((.(((&))).)).)))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330615
GeneSymbolPPARG
Binding site935,954
Score0.846
Seed0
Au0.441
Energy-18.8
Binding len19
Me-8.492
Phylopstem5.334143166666666
Phylopflank4.494845894125
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure